John 3:6

To excite his spirit and attention, our Saviour again expresses the authority of his person, and twice repeats the solemn asseveration, to show the infallible certainty and importance of what he propounds, that it is a truth worthy of his most serious consideration, and to be embraced with a stedfast belief. After this preface, he declares, If any one be not born of water and the Spirit, to rectify the carnal conceit of Nicodemus about regeneration. In Joh 3:3 our Saviour compared the spiritual birth with the natural, and with respect to that a reviewed man is born a second time. But in this verse he expresses the cause and quality of the new birth, that distinguishes it from the natural birth, and resolves the vain, carnal objection of Nicodemus. He speaks not of the terrestrial, animal birth, but of the celestial and Divine; that is suitable to that principle from whence it proceeds, the Holy Spirit of God. There is a great difference among interpreters about the meaning of being The Romanists, and rigid Lutherans, understand the water in a proper sense, for the element of baptism, and from hence infer the absolute necessity of baptism for salvation; but the exposition and conclusion are both evidently contrary to the truth. Indeed the new birth is signified, represented, and sealed by baptism, it is the soul, and substance of that sacred ceremony; and if our Saviour had only said, that whoever is born of water and the Spirit shall enter into the kingdom of heaven, it might have been congruously understood of baptism; because it is an undoubted truth, that all who are truly regenerated in baptism shall be saved. But our Saviour says, He that is not born of water and the Spirit cannot enter into the kingdom of heaven: the exclusion of the unsanctified is peremptory and universal. And our Saviour shows a manifest difference between an affirmative and negative proposition; when having declared, that whoever believeth and is baptized shall be saved; and coming to the negative, he only adds, but he that believeth not shall be damned, Mar 16:16. The reason why he does not say, Whoever is not baptized shall be condemned, is evident; for without faith it is impossible to be saved; but without baptism, even as the Romanists themselves grant, many have been saved. For if we consider the time when our Saviour spake these words, they acknowledge that believers were not then, obliged to receive the baptism of Christ for salvation; for our Saviour had this conference with him some years before his death; and they hold, that before the death of Christ baptism was not necessary, neither by virtue of Divine command, nor as a means to obtain salvation; therefore the believers that lived then might enter into heaven without baptism. They also declare, that martyrdom supplies the want of baptism; and that persons instructed in the doctrine of the gospel, and sincerely believing it, if prevented by death without being baptized, their faith and earnest desire is sufficient to qualify them for partaking of the heavenly kingdom. But if by water here be meant the elementary water of baptism, the words of our Saviour are directly contrary to what they assert; for neither the blood of martyrs, nor the desire and vow of receiving baptism, are the water of baptism, which they pretend is properly and literally named by our Saviour. And certainly, if as the apostle Peter instructs us, it is not the cleansing of the flesh in the water of baptism that says, 1Pe 3:21, it is not the mere want of it, without contempt and wilful neglect, that condemneth. By then we are to understand the grace of the Holy Spirit in purifying the soul, which is fitly represented by the efficacy of water. And this purifying, refreshing virtue of the Spirit is promised in the prophecies that concern the times of the Messiah, under the mystical expression of water. Thus it is twofold by Isaiah, I will pour water upon him that is thirsty, and floods upon the dry ground, Isa 44:3. And this is immediately explained, I will pour my Spirit upon thy seed; and the Divine birth follows, they shall spring up as among the grass. In the same manner the effects of the Holy Spirit are expressed by Ezekiel: I will sprinkle clean water upon you, and ye shall be clean; and presently after, I will put my Spirit within you, Eze 36:25,27. Our Saviour instructing a Pharisee, to whom the prophetical writings were known, expressly uses these two words, and in the same order as they are all set down there, first water, and then the Spirit, that the latter might interpret the former; for water and the Spirit, by a usual figure when two words are employed to signify the same thing, signify spiritual water, that is, his Divine grace in renewing the soul; as when the apostle says, in demonstration of the Spirit and of power, to signify the powerful Spirit. Thus John the Baptist foretold of Christ, that he should baptize with the Holy Ghost and fire, that is, with the Spirit, that has the force and efficacy of fire to refine us from our dross and corruptions. Thus our Saviour plainly instructs Nicodemus of the absolute necessity of an inward spiritual change and renovation, thereby showing the inefficacy of all the legal washings and sprinklings, that could not purify and make white one soul, which were of high valuation among the Jews. Entering into the kingdom of God, is of the same import and sense with the seeing the kingdom of God, in Joh 3:3: that is, without regeneration no man can truly be joined with the society of the church of God, nor partake of the celestial privileges and benefits belonging to it, here and hereafter.

[c.] The necessity of this change. First, Christ here shows that it is necessary in the nature of the thing, for we are not fit to enter into the kingdom of God till we are born again: That which is born of the flesh if flesh, v. 6. Here is our malady, with the causes of it, which are such that it is plain there is no remedy but we must be born again. 1. We are here told what we are: We are flesh, not only corporeal but corrupt, Gen 6 3. The soul is still a spiritual substance, but so wedded to the flesh, so captivated by the will of the flesh, so in love with the delights of the flesh, so employed in making provision for the flesh, that it is mostly called flesh; it is carnal. And what communion can there be between God, who is a spirit, and a soul in this condition? 2. How we came to be so; by being born of the flesh. It is a corruption that is bred in the bone with us, and therefore we cannot have a new nature, but we must be born again. The corrupt nature, which is flesh, takes rise from our first birth; and therefore the new nature, which is spirit, must take rise from a second birth. Nicodemus spoke of entering again into his mother's womb, and being born; but, if he could do so, to what purpose? If he were born of his mother a hundred times, that would not mend the matter, for still that which is born of the flesh if flesh; a clean thing cannot be brought out of an unclean. He must seek for another original, must be born of the Spirit, or he cannot become spiritual. The case is, in short, this: though man is made to consist of body and soul, yet his spiritual part had then so much the dominion over his corporeal part that he was denominated a living soul (Gen 2 7), but by indulging the appetite of the flesh, in eating forbidden fruit, he prostituted the just dominion of the soul to the tyranny of sensual lust, and became no longer a living soul, but flesh: Dust thou art. The living soul became dead and inactive; thus in the day he sinned he surely died, and so he became earthly. In this degenerate state, he begat a son in his own likeness; he transmitted the human nature, which had been entirely deposited in his hands, thus corrupted and depraved; and in the same plight it is still propagated. Corruption and sin are woven into our nature; we are shapen in iniquity, which makes it necessary that the nature be changed. It is not enough to put on a new coat or a new face, but we must put on the new man, we must be new creatures. Secondly, Christ makes it further necessary, by his own word: Marvel not that I said unto thee, You must be born again, v. 7. 1. Christ hath said it, and as he himself never did, nor ever will, unsay it, so all the world cannot gainsay it, that we must be born again. He who is the great Lawgiver, whose will is a law,—he who is the great Mediator of the new covenant, and has full power to settle the terms of our reconciliation to God and happiness in him,—he who is the great Physician of souls, knows their case, and what is necessary to their cure,—he hath said, You must be born again. "I said unto thee that which all are concerned in, You must, you all, one as well as another, you must be born again: not only the common people, but the rulers, the masters in Israel." 2. We are not to marvel at it; for when we consider the holiness of the God with whom we have to do, the great design of our redemption, the depravity of our nature, and the constitution of the happiness set before us, we shall not think it strange that so much stress is laid upon this as the one thing needful, that we must be born again.

[d.] This change is illustrated by two comparisons. First, The regenerating work of the Spirit is compared to water, v. 5. To be born again is to be born of water and of the Spirit, that is, of the Spirit working like water, as (Matt 3 11) with the Holy Ghost and with fire means with the Holy Ghost as with fire. 1. That which is primarily intended here is to show that the Spirit, in sanctifying a soul, (1.) Cleanses and purifies it as water, takes away its filth, by which it was unfit for the kingdom of God. It is the washing of regeneration, Tit 3 5. You are washed, 1 Cor 6 11. See Ezek 36 25. (2.) Cools and refreshes it, as water does the hunted hart and the weary traveller. The Spirit is compared to water, ch. 7 38, 39; Isa 44 3. In the first creation, the fruits of heaven were born of water (Gen 1 20), in allusion to which, perhaps, they that are born from above are said to be born of water. 2. It is probable that Christ had an eye to the ordinance of baptism, which John had used and he himself had begun to use, "You must be born again of the Spirit," which regeneration by the Spirit should be signified by washing with water, as the visible sign of that spiritual grace: not that all they, and they only, that are baptized, are saved; but without that new birth which is wrought by the Spirit, and signified by baptism, none shall be looked upon as the protected privileged subjects of the kingdom of heaven. The Jews cannot partake of the benefits of the Messiah's kingdom, they have so long looked for, unless they quit all expectations of being justified by the works of the law, and submit to the baptism of repentance, the great gospel duty, for the remission of sins, the great gospel privilege. Secondly, It is compared to wind: The wind bloweth where it listeth, so is every one that is born of the Spirit, v. 8. The same word (pneuma) signifies both the wind and the Spirit. The Spirit came upon the apostles in a rushing mighty wind (Acts 2 2), his strong influences on the hearts of sinners are compared to the breathing of the wind (Ezek 37 9), and his sweet influences on the souls of saints to the north and south wind, Cant 4 16. This comparison is here used to show, 1. That the Spirit, in regeneration, works arbitrarily, and as a free agent. The wind bloweth where it listeth for us, and does not attend our order, nor is subject to our command. God directs it; it fulfils his word, Ps 148 8. The Spirit dispenses his influences where, and when, on whom, and in what measure and degree, he pleases, dividing to every man severally as he will, 1 Cor 12 11. 2. That he works powerfully, and with evident effects: Thou hearest the sound thereof; though its causes are hidden, its effects are manifest. When the soul is brought to mourn for sin, to groan under the burden of corruption, to breathe after Christ, to cry Abba—Father, then we hear the sound of the Spirit, we find he is at work, as Acts 9 11, Behold he prayeth. 3. That he works mysteriously, and in secret hidden ways: Thou canst not tell whence it comes, nor whither it goes. How it gathers and how it spends its strength is a riddle to us; so the manner and methods of the Spirit's working are a mystery. Which way went the Spirit? 1 Kings 22 24. See Eccl 11 5, and compare it with Ps 139 14.

(1.) As pertinently answered to Nicodemus's address. Jesus answered, v. 3. This answer was wither, [1.] A rebuke of what he saw defective in the address of Nicodemus. It was not enough for him to admire Christ's miracles, and acknowledge his mission, but he must be born again. It is plain that he expected the kingdom of heaven, the kingdom of the Messiah now shortly to appear. He is betimes aware of the dawning of that day; and, according to the common notion of the Jews, he expects it to appear in external pomp and power. He doubts not but this Jesus, who works these miracles, is either the Messiah or his prophet, and therefore makes his court to him, compliments him, and so hopes to secure a share to himself of the advantages of that kingdom. But Christ tells him that he can have no benefit by that change of the state, unless there be a change of the spirit, of the principles and dispositions, equivalent to a new birth. Nicodemus came by night: "But this will not do," saith Christ. His religion must be owned before men; so Dr. Hammond. Or, [2.] A reply to what he saw designed in his address. When Nicodemus owned Christ a teacher come from God, one entrusted with an extraordinary revelation from heaven, he plainly intimated a desire to know what this revelation was and a readiness to receive it; and Christ declares it.

Verses 1-8 Nicodemus was afraid, or ashamed to be seen with Christ, therefore came in the night. When religion is out of fashion, there are many Nicodemites. But though he came by night, Jesus bid him welcome, and hereby taught us to encourage good beginnings, although weak. And though now he came by night, yet afterward he owned Christ publicly. He did not talk with Christ about state affairs, though he was a ruler, but about the concerns of his own soul and its salvation, and went at once to them. Our Saviour spoke of the necessity and nature of regeneration or the new birth, and at once directed Nicodemus to the source of holiness of the heart. Birth is the beginning of life; to be born again, is to begin to live anew, as those who have lived much amiss, or to little purpose. We must have a new nature, new principles, new affections, new aims. By our first birth we were corrupt, shapen in sin; therefore we must be made new creatures. No stronger expression could have been chosen to signify a great and most remarkable change of state and character. We must be entirely different from what we were before, as that which begins to be at any time, is not, and cannot be the same with that which was before. This new birth is from heaven, ch. 1:13 , and its tendency is to heaven. It is a great change made in the heart of a sinner, by the power of the Holy Spirit. It means that something is done in us, and for us, which we cannot do for ourselves. Something is wrong, whereby such a life begins as shall last for ever. We cannot otherwise expect any benefit by Christ; it is necessary to our happiness here and hereafter. What Christ speak, Nicodemus misunderstood, as if there had been no other way of regenerating and new-moulding an immortal soul, than by new-framing the body.…